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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881610.1_cds_XP_016437829.1_33555
CDS Infomation

[gene=LOC107763841] [db_xref=GeneID:107763841] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016437829.1] [location=complement(join(154..579,1166..1424,2040..2147,2226..2366,2550..2671,2764..2835,3029..3088,3468..3650))] [gbkey=CDS]
Sequence

ATGGGGCAGAAGTTGAGCTGTGTACAGCAACCCCATGAACATGGACTGTTCAGTGCAGTC
CAAAATGGTGAGCTTGAAAAAGTTGAAGCTATGATTAATGAAGACCCAAATGTGCTTCAT
ATTACCAGTGTTCGTGGGAAGCTCTCTGCACTTCATGTTGCTGCTGCTAATGCACAGATC
GAGGTGCTATCTGTTCTCTTGGATCGTGGGGTTAATCCAGACATTTTGAATCGCCATAAA
CAGACCCCATTGATGTTAGCTGCTATGCATGGAAATGTGTCCTGCGTGGAGAGATTAATT
CAGCGAGGTGCTAATATTTTAACGTTTGATTCACTACATGGAAGAACCTGTTTGCATTAT
GCTGCTTACCATGGCCATTCTGACTGCCTGCAATCGATCCTTGCATCCGCTCATTCGGCT
CCTGTTGCTCAATCTTGGGGATTTGCGAGATTTGTGAACATAAGAGATGGAAGTGGTGCA
ACTCCATTGCACTTGGCAGCCCGTCATGGTAGACCAGGATGTGTCCGGATTCTTCTGAGC
AACGATGCTCTTGTCTGTGTTTCTAGTGGTAGCTACGGCCGACCAGGAAGTACACCATTG
CATTTGGCAGCTCGAGGAGGTTCTTTGGACTGTGTACGGGAGTTACTTGCTTGGGGTGCA
GATCGACTTCGGAGAGATTCTTCTGGGCGAATACCTTACTTAGTTGCTTTGAAGTACAAG
CATGAAGCATGTGGTGCTCTCTTAAATCCATCATCTCCAGAGCCTTTGACCTGGCCATCG
CCCTTGAAGTTTATTACTGAGCTTGACGCCGAGGCAAAAGCTTTACTAGAAAACGCTCTT
ATTGAGGCCAACAAAGATAGAGAGAAGTTGATATTGAAAAAGACAGCTGTCTCACATACA
TCGCCTTTACATTGTGATTCTGGCCTTGAGAGTGATGACTTTGAGGGCAGTGATTTTGAG
CTATGTTGCATATGTTTCGAGCAGTCCTGCACAATTGAGATTCAAAAGTGTGGCCATCAG
ATGTGTGCTCATTGCACTCTAGCCTTATGTTGTCACAATAAGCCCAACCCTGCAAGTAAT
AATAGTGAGAAGGTTCCAGTATGCCCCTTTTGCCGGAGTGATATCACTCATTTAGTCGTG
GTCCAGAATAAAGTAGACAGTTACGAAGAGGAATTGAGTCCCTCACGGCCAAGAAAATCA
AGAACATCTTTCAGCCTTACTGAAGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTAGCAGCAGCTTGAGAGTTTTGTCACCCTTAGCCTCATTCGGGAAGTTGGGTGGTCGC
CATTCAGGCAAAATTGGTGCAGAATGCATTGAAGTGTTTGCCAAGCCTTAA

Peptide Sequence

PEP ID

XP_016437829.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQKLSCVQQPHEHGLFSAVQNGELEKVEAMINEDPNVLHITSVRGKLSALHVAAANAQI
EVLSVLLDRGVNPDILNRHKQTPLMLAAMHGNVSCVERLIQRGANILTFDSLHGRTCLHY
AAYHGHSDCLQSILASAHSAPVAQSWGFARFVNIRDGSGATPLHLAARHGRPGCVRILLS
NDALVCVSSGSYGRPGSTPLHLAARGGSLDCVRELLAWGADRLRRDSSGRIPYLVALKYK
HEACGALLNPSSPEPLTWPSPLKFITELDAEAKALLENALIEANKDREKLILKKTAVSHT
SPLHCDSGLESDDFEGSDFELCCICFEQSCTIEIQKCGHQMCAHCTLALCCHNKPNPASN
NSEKVPVCPFCRSDITHLVVVQNKVDSYEEELSPSRPRKSRTSFSLTEGGSSSSSSSSSS
SSSSLRVLSPLASFGKLGGRHSGKIGAECIEVFAKP

Transcript Sequence

Gene sequence data has not been registered.